This function will create a genome annotation object that can be used for creating ArrowFiles or an ArchRProject, etc.
createGenomeAnnotation( genome = NULL, chromSizes = NULL, blacklist = NULL, filter = TRUE, filterChr = c("chrM") )
Either (i) a string that is a valid
A boolean value indicating whether non-standard chromosome scaffolds should be excluded.
These "non-standard" chromosomes are defined by
A character vector indicating the seqlevels that should be removed if manual removal is desired for certain seqlevels.
If no manual removal is desired,